BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B02LP1|AL427111
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1752 1500 0.0
>3x_Contig1752
Length = 22471
Score = 1500 bits (744), Expect = 0.0
Identities = 870/915 (95%), Gaps = 10/915 (1%)
Strand = Plus / Minus
Query: 1 atctgatgattgtgcngctgaattgtttgccgaagattcgtctaccgtttgcatagaatt 60
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 20088 atctgatgattgtgctgctgaattgtgtgccgaagattcgtctaccgtttgcatagaatt 20029
Query: 61 gtckkdtwnna-ctctaaacaattagtggggttgacctcgacatttagttttagtaagtc 119
||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20028 gtcggggaacaactctaaacaattagtggggttgacctcgacatttagttttagtaagtc 19969
Query: 120 atgwatggttgtggtcaaatcacaaatcatattgcttagtctcgtgacaagctctggtgt 179
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19968 atgaatggttgtggtcaaatcacaaatcatattgcttagtctcgtgacaagctctggtgt 19909
Query: 180 catttctggtagcttcccctcagcatctggtaagtcaagtaaagtgtcagtgaattgtct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19908 catttctggtagcttcccctcagcatctggtaagtcaagtaaagtgtcagtgaattgtct 19849
Query: 240 tttaattgamaggaatgcacggaataggcctggtatagttttattttcgttatgttcacc 299
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19848 tttaattgaaaggaatgcacggaataggcctggtatagttttattttcgttatgttcacc 19789
Query: 300 gacaagaggtagaggtttctcgaaagacgatcttctggcttggcatagtcttgataggaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19788 gacaagaggtagaggtttctcgaaagacgatcttctggcttggcatagtcttgataggaa 19729
Query: 360 atagcctaactccatattatcaactataattcgaattctttctggatcctcgtcaacgtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19728 atagcctaactccatattatcaactataattcgaattctttctggatcctcgtcaacgtt 19669
Query: 420 ccatttatccgtttcctggccggtaccatcatttgatacttcgtcataaaatagctttga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19668 ccatttatccgtttcctggccggtaccatcatttgatacttcgtcataaaatagctttga 19609
Query: 480 tgcagtcgtttcgtcaagcttcaaattcattaatttgggcacaccgaaagaacaagattg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19608 tgcagtcgtttcgtcaagcttcaaattcattaatttgggcacaccgaaagaacaagattg 19549
Query: 540 taaagagtcaaatgtattcaattcaaaatacaatcgcwaacagatacttatcgtagacac 599
||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||| |
Sbjct: 19548 taaagagtcaaatgtattcaattcaaaatacaatcgcaaacagat-cttatcgt-gac-c 19492
Query: 600 agtaacagtattccaattgccgaagataaaatttttccagagctttaattcattgaaaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19491 agtaacagtattccaattgccgaagataaaatttttccagagctttaattcattgaaaat 19432
Query: 660 wattaccgacattccaargwcgaaagagwtgttatagcwgactatagcyaatgtacaatt 719
|||||||||||||||| | |||||||| ||||||||| ||||| ||| || ||||||||
Sbjct: 19431 aattaccgacattccaaggacgaaagagttgttatagctgactaaagccaaagtacaatt 19372
Query: 720 agargataatgaatgtatcaagatatatmgtarcaaatttcacatcaatttgaggwwtmc 779
|| ||||||||||||| |||||||||| ||| ||| |||| |||||||||| || | |
Sbjct: 19371 -gaggataatgaatgtaacaagatatatcgtagcaattttctcatcaatttg-ggtttcc 19314
Query: 780 aagtctctaaaccttggatgaatat-cacaatttttctrgaaacattcattgatagcact 838
||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||
Sbjct: 19313 aagtctctaaaccttggatgaatatccacaa-ttttctggaaacattcattgatagcact 19255
Query: 839 kacatacgttkagttgttgatactatatwtcttctgattctttgtccttttaaacagatg 898
||| ||||| | |||||||||| |||| |||||||||||||||| ||||||||||||||
Sbjct: 19254 gacaaacgttga-ttgttgatacaatatttcttctgattctttgt-cttttaaacagatg 19197
Query: 899 cgaataagtagttcc 913
|||||||||||||||
Sbjct: 19196 cgaataagtagttcc 19182
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5825
Number of Sequences: 1807
Number of extensions: 5825
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)